Hi wbourgeois,

Welcome to the IFSQN forums
Your request for exemption needs to be submitted to the certification body prior to the certification audit. Refer to SQF Food Safety Code: Food Manufacturing, Edition 9, A2: Steps to Achieving SQF Certification (steps 1 – 10).
See Step 3: Determine the Scope of Certification
Note: The scope of certification specifies:
The site. SQF certification is site specific. The entire site, including all premises, support buildings, silos, tanks, loading and unloading bays, and external grounds are identified and included in the scope of certification.
Food sector categories (FSCs). SQFI has a list of food sector categories to classify product groups and ensure that the auditor who audits your site has the requisite knowledge and skills. You want to apply for FSC 13: Bakery and Snack Food Processing
The products. SQF certification is product specific. Within each applicable food sector category, you need to identify the products (e.g., frozen peas) that are included in your SQF System. The manufacture of all listed products will be audited for compliance to SQF and will be listed on the certificate of compliance unless you request an exemption (refer to Part A 3.1).
See 3.1 Exemptions
If you wish to exempt any products processed or handled on-site or part of the premises, the request for exemption needs to be submitted to the certification body in writing prior to the certification audit, detailing the reason for exemption.
If approved by the certification body, exemptions are listed in the site description in the SQFI assessment database and in audit reports. However, all parts of the premises and processes that are involved with the production, processing, and storage of products included in the scope cannot be exempted.
I think it would pay to discuss this with a suitable certification body now.
Kind regards,
Tony